PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA40G00028
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 342aa    MW: 37429.7 Da    PI: 9.1422
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA40G00028genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.12.5e-15152203455
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                 +kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN+ L k l   +++
  AA40G00028 152 VKRVRRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSNLMKGLTDVTQT 203
                 79****************************************9988776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-17149213IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.967151202IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.02E-12152202No hitNo description
PfamPF001702.5E-13152199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-11153202No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
PfamPF124982.6E-31220337IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEKVDSVEEI WPPINRSDSE WAFHRFIQES SVAIDAASSG EVTTAYGVSI SGPPSPSVPV  60
DSEEYRAYLK SKLNLACAAV AMKRVSFSKP QDTSGRTDNI THGFSASEHG SPASSRATPK  120
MSSATVRSIT SGSEFSGDEE VDGETNMNPT NVKRVRRMLS NRESARRSRR RKQAHLSELE  180
TQVSQLRVEN SNLMKGLTDV TQTFNDAAVE NRVLKANIET LRAKVKMAEE TVKRITGLNP  240
MFQTTSAGVS TISVHSFNGS PSETSTDQAI SVQDEPRTHM YNASPNDSLA TSDSICVRET  300
TPEISSTKSK GLIGCKIKRT PSMRRVASLE HLQKRIRSVG DQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165172RRSRRRKQ
2167172SRRRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006395031.11e-140hypothetical protein EUTSA_v10004611mg
SwissprotB9DGI81e-138BZP63_ARATH; Basic leucine zipper 63
TrEMBLE4MXL81e-140E4MXL8_EUTHA; mRNA, clone: RTFL01-34-D15
TrEMBLV4KQP71e-140V4KQP7_EUTSA; Uncharacterized protein
STRINGfgenesh2_kg.6__2797__AT5G28770.21e-137(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM68462743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-128bZIP family protein